Selected Publications
2024
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Vemparala B et al. Antiviral capacity of the early CD8 T-cell response is predictive of natural control of SIV infection: Learning in vivo dynamics using ex vivo data. PLoS Computational Biology 2024.
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Zaaraoui H et al. Modelling the effectiveness of antiviral treatment strategies to prevent household transmission of acute respiratory viruses. PLoS Computational Biology 2024.
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Beaulieu M et al. Antiviral effect of Evusheld in COVID-19 hospitalized patients infected with pre-Omicron or Omicron variants: a modeling analysis of the randomized DisCoVeRy trial. Journal of Antimicrobial Chemotherapy 2024.
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El Messaoudi et al. Effect of Peg-IFN on the viral kinetics of HDV infected patients treated with bulevirtide. JHEP reports 2024.
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2023
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Nguyen BT et al. Early administration of tecovirimat shortens the time to mpox clearance in a model of human infection. PLoS Biology 2023.
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Lingas G et al. Neutralizing Antibody Levels as a Correlate of Protection Against SARS-CoV-2 Infection: A Modeling Analysis. Clinical Pharmacology and Therapeutics 2023.
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Kerioui M et al. Nonlinear multilevel joint model for individual lesion kinetics and survival to characterize intra-individual heterogeneity in patients with advanced cancer. Biometrics 2023.
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Clairon Q et al. Modeling the kinetics of the neutralizing antibody response against SARS-CoV-2 variants after several administrations of Bnt162b2. PLoS Computational Biology 2023.
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Marc A et al. Impact of variants of concern on SARS-CoV-2 viral dynamics in non-human primates. PLoS Computational Biology 2023.
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2022
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Mitja O et al. Viral dynamics in patients with monkeypox infection: a prospective cohort study in Spain. The Lancet Infectious Diseases 2022.
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El Messaoudi S et al. A semi-mechanistic model to characterize the long-term dynamic of HBV markers during treatment with lamivudine and Peg-IFN. Clinical Pharmacology and Therapeutics 2022.
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Marlin R et al. Antiviral efficacy of favipiravir against Zika and SARS-CoV-2 viruses in non-human primates. Nature communications 2022.
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Delattre R et al. Combination of in vivo phage therapy data with in silico model highlights key parameters for treatment efficacy. Cell Reports 2022.
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Lingas G et al. Effect of remdesivir on viral dynamics in COVID-19 hospitalized patients: a modeling analysis of the randomized, controlled, open-label DisCoVeRy trial. Journal of Antimicrobial Chemotherapy 2022.
2021
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Marc A et al. Quantifying the relationship between SARS-CoV-2 viral load and infectiousness. Elife 2021.
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Maisonnasse P et al. COVA1-18 neutralizing antibody protects against SARS-CoV-2 in three preclinical models. Nature Communications 2021.
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Gonçalves A et al. SARS-CoV-2 viral dynamics in non-human primates. PLoS Computational Biology 2021.
Néant et al. Modeling SARS-CoV-2 viral kinetics and association with mortality in hospitalized patients: results from the French Covid-19 cohort. PNAS 2021.
​​Czuppon P et al. Success of prophylactic antiviral therapy for SARS-CoV-2: predicted critical efficacies and impact of different drug-specific mechanisms of action. PLoS Computational Biology 2021.
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2020
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​2019
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2018
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2017
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